STAR

STAR alignReads

STAR alignReads

Version:
2.5
Identifier: TL_8ab263_a4.82
Tool

Description


In this step user supplies the genome files generated in the 1st step, as well as the RNA-seq reads (sequences) in the form of FASTA or FASTQ files. STAR maps the reads to the genome, and writes several output files, such as alignments (SAM/BAM), mapping summary statistics, splice junctions, unmapped reads, signal (wiggle) tracks etc.

Links
  • Documentation

    https://github.com/alexdobin/STAR/blob/master/doc/STARmanual.pdf

Author(s)

Code Repository

  • GitHiub

    https://github.com/alexdobin/STAR

Biostars

No Biostars posts found