Truwl

BETA
Home / Tools / STAR alignReads

Back to STAR

Back To Tools

Overview
In this step user supplies the genome files generated in the 1st step, as well as the RNA-seq reads (sequences) in the form of FASTA or FASTQ files. STAR maps the reads to the genome, and writes several output files, such as alignments (SAM/BAM), mapping summary statistics, splice junctions, unmapped reads, signal (wiggle) tracks etc.
Associations
Tool Uses
  • STAR:2.5.1b:a516f5a4

    Runs a STAR mapping job. Creates alignments to the genome and transcriptome with associated log files.

Workflows

No workflows found