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STAR
Version:
2.7.x
Identifier:
TL_8ab263.6f
Tool
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Overview
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Description
Ultrafast universal RNA-seq aligner
Subtools
STAR genomeGenerate
Create a STAR index form a
STAR alignReads
Perform spliced alignment
Links
http://code.google.com/p/rna-star/
https://github.com/alexdobin/STAR/releases
Tags
RNA-Seq
Transcriptomics
Sequence alignment
RNA-Seq analysis
View all
Biostars
Hera: A new tool for RNA-Seq analysis
RNA-seq: Explain STAR quantMode geneCounts values
(Modern, mid-2016) RNA-seq software pipeline
STARsolo config for 10x Chromium v1, v2, v3
Difference between GTF file with CHR and without CHR. ENSEMBL
STAR align multiple files
Why Am I Getting So Many Unmapped Reads In Star, Classified As "Too Short"?
bash script for RNA seq alignment with STAR
generating genome indexes with STAR
How do you normalize Transcript per Million TPM to compare between samples ?
What are the best set of options to use while aligning using STAR?
htseq-count overcounting non-unique alignments
STAR can not detect this chimeric read
Fusion detection tool error (STAR-fusion, STAR-SEQR,arriba)
Long Read Length, yet STAR says many reads too short
Can STAR work with compressed .gz FASTQ input?
choosing a suitable max intron size for STAR (plant alignment)
STAR aligner -- Alignment.out.sam missing
STAR - genome indexes generation, genome file not created
rRNA detection (for contamination) in RNA-seq
