Find and remove adapter sequences, primers, poly-A tails and other types of unwanted sequence from your high-throughput sequencing reads.
Trim single-end reads using cutadapt.
trim paired reads
Probes and primers
Differences between trimming tools: cutadapt, bbduk and sickle
cutadapt for trimming reads to specific length
Trimming Illumina universal adapters using cutadapt proving insufficient
How to - Install Python packages in a virtual environment (virtualenv)
cutadapt error while performing Trim_Galore
Using cutadapt over multiple adapters
Issues with adapter trimming when there are no adapters?
cutadapt loop and paired-end reads
Illumina index adapter trimming of FASTQ files using Cutadapt/TrimGalore
What's the difference between Trim galore and Cutadapt when it comes to quality trimming ?
miRNA fastqc sequence length distribution with UMI
How to apply CUTADAPT on multiple fastq files using linux?
cutadapt: forward and reverse adapter sequence options
Cutadapt paired end reads with 1 adapter list fasta
comparing softwares for trimming adaptors
CGHub/TCGA RNA-Seq data trimming adapters
Where to get list of all Illumina adapters
Cutadapt installation problem
Trim barcode 3'
piping cutadapt --paired-output into bwa ? logs are written to stdout