hicexplorer

hicexplorer hicfindtads

hicexplorer hicfindtads

Version:
3.6
Identifier: TL_1c3c14_ee.e4
Tool

Description


Uses a measure called TAD-separation score to identify the degree of separation between the left and right regions at each Hi-C matrix bin. This is done for a running window of different sizes. Then, TADs are called as those positions having a local TAD-separation score minimum.

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