picard FixMateInformation

Version:
2.20.x
Identifier: TL_e24fa5_0f.c8

Back to picard

Back To Tools

Overview

Verify mate-pair information between mates and fix if needed. This tool ensures that all mate-pair information is in sync between each read and its mate pair. If no OUTPUT file is supplied then the output is written to a temporary file and then copied over the INPUT file. Reads marked with the secondary alignment flag are written to the output file unchanged.

Associations
Subtools

No subtools found

Tool Uses

No tool instances found

Workflows

No workflows found

Meta