picard MarkIlluminaAdapters

Version:
2.20.x
Identifier: TL_e24fa5_07.c8

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Overview

Reads a SAM or BAM file and rewrites it with new adapter-trimming tags. This tool clears any existing adapter-trimming tags (XT:i:) in the optional tag region of a SAM file. The SAM/BAM file must be sorted by query name. Outputs a metrics file histogram showing counts of bases_clipped per read.

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