picard SamToFastq

Version:
2.20.x
Identifier: TL_e24fa5_3b.c8

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Overview

Converts a SAM or BAM file to FASTQ. This tool extracts read sequences and base quality scores from the input SAM/BAM file and outputs them in FASTQ format. This can be used by way of a pipe to run BWA MEM on unmapped BAM (uBAM) files efficiently.

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