rseqc

rseqc junction_annotation

rseqc junction_annotation

Version:
4.0.0
Identifier: TL_73aadb_30.49
Tool

Description


For a given alignment file (-i) in BAM or SAM format and a reference gene model (-r) in BED format, this program will compare detected splice junctions to reference gene model. splicing annotation is performed in two levels - splice event level and splice junction level.

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