samtools

samtools fasta

samtools fasta

Version:
1.3
Identifier: TL_ec2a8d_2d.0b
Tool

Description


samtools fastq [options] in.bam samtools fasta [options] in.bam Converts a BAM or CRAM into either FASTQ or FASTA format depending on the command invoked. The files will be automatically compressed if the file names have a .gz or .bgzf extension. The input to this program must be collated by name. Use samtools collate or samtools sort -n to ensure this.

Tags

No Tags found

Biostars

No Biostars posts found