Integrated structural variant prediction method that can discover, genotype and visualize deletions, tandem duplications, inversions and translocation

Tool for predicting effects of variants for any genome in Ensembl or with genome annotation (via GFF). This includes vertebrates and also plants, fung

A set of command line tools for manipulating high-throughput sequencing (HTS) data in formats such as SAM/BAM/CRAM and VCF. Available as a standalone

Provide easily accessible methods for working with complex genetic variation data in the form of VCF files.

Tool for predicting effects of variants for any genome in Ensembl or with genome annotation (via GFF). This includes vertebrates and also plants, fung