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Tool Library list page for genomics topic with tag 'Mapping'
Bowtie is an ultrafast, memory-efficient short read aligner.
Bowtie 2 is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning read
Burrow-Wheeler Aligner for pairwise alignment between DNA sequences
Fast, accurate, memory-efficient aligner for short and long sequencing reads
A versatile pairwise aligner for genomic and spliced nucleotide sequences
Disambiguating two species in next generation sequencing data from grafted samples. Operates on DNA or RNA-seq alignments to the two species and separ
A software package with various utilities for processing alignments in the SAM format, including variant calling and alignment viewing.
Subread is a general-purpose read aligner which can be used to map both genomic DNA-seq reads and RNA-seq reads. It uses a new mapping paradigm called