ENCODE Long read RNA-seq pipeline

Version:
v2.0.0
Identifier: WF_308a61.8f
Workflow

Description


This is the ENCODE-DCC Long read RNA-seq pipeline. This pipeline can handle data from both PacBio and Oxford Nanopore platforms. Pipeline does read alignment, corrects for mismatches, microindels and non-canonical splice junctions and then provides quantitations and QC-metrics.

Links

Code Repository

  • GitHub

    https://github.com/ENCODE-DCC/long-read-rna-pipeline

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