GTEx

Version:
v10
Identifier: WF_254045.d5
Workflow

Description


SamToFastq: BAM to FASTQ conversion STAR: spliced alignment of RNA sequence reads (v2.7.9a) Picard MarkDuplicates: mark duplicate reads RSEM transcript expression quantification (v1.3.3) bamsync: utility for transferring QC flags from the input BAM and for re-generating read group IDs RNA-SeQC: QC metrics and gene-level expression quantification (v2.4.2)

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