PEPPER-Margin-DeepVariant

Version:
0.7
Identifier: WF_edcb65.c7
Workflow
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Description

Variant calling for long reads - utilizes PEPPER for SNP calling, Margin for haplotyping and phasing, and DeepVariant for genotype calling

Links
  • PEPPER-Margin-DeepVariant

    https://github.com/kishwarshafin/pepper

Code Repository
  • https://github.com/truwl/deeppepper